scmutil: add a function to mark that files have been operated on
Several places use scmutil.addremove as a means to declare that certain files
have been operated on. This is ugly because:
- addremove takes patterns relative to the cwd, not paths relative to the root,
which means extra contortions for callers.
- addremove doesn't make clear what happens to files whose status hasn't
changed.
This new method accepts filenames relative to the repo root, and has a much
clearer contract. It also allows future modifications that do more with files
whose status hasn't changed.
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