dirstate: remove a update_file's special case for tracked file with p2 data
This case was fishy and can be dealt with by passing more accurate data a higher
level.
This clarify the API and prepare for a larger rework of the data we feeds to
the dirstate.
dirstate: deprecate `__getitem__` access
If we want to drop `state` usage, we need to deprecate this.
Differential Revision: https://phab.mercurial-scm.org/D11544